ome-zarr-py

Tools for reading and writing multi-resolution images stored in Zarr filesets, according to the OME NGFF spec.

Features

• Command-line tool for reading and downloading OME-NGFF filesets.

• Python API for reading and writing OME-NGFF filesets (see Python tutorial for example usage).

• Used by the napari-ome-zarr plugin for viewing OME-NGFF filesets in napari.

Contents

• Command-line tool
• Python tutorial
• Python API

Installation

Install the latest release of ome-zarr from PyPI:

pip install ome-zarr

or from conda-forge:

conda install -c conda-forge ome-zarr

License

Distributed under the terms of the BSD license, “ome-zarr-py” is free and open source software